{testdown} report for {FishMap}

Performed on the: 2023-04-13 12:29:27 , using {testdown} version 0.1.2

Tested Package Information:

  • Title : Spatial-temporal Models For Fish Distributions with ‘TMB’
  • Version : 0.0.1
  • Description : Combine survey and VMS data to model the distribution of fish using ‘TMB’ models.

Project Information:

  • Project Name : FishMap

  • Environment : /home/runner/work/FishMap/FishMap

  • Number of test file(s) : 8

Result Overview:

  • Number of test(s) : 9

  • Number of expectation(s) : 127

  • Number of successful expectation(s) : 76

  • Number of failed expectation(s) : 0

  • Number of errored expectation(s) : 0

  • Number of expectation(s) with warning(s) : 19

  • Number of validated skip expectation(s) : 0

  • Number of skipped expectation(s) : 32

Help:

Test session infrastructure (click to expand) 
R version 4.2.3 (2023-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.2 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] FishMap_0.0.1  testthat_3.1.7

loaded via a namespace (and not attached):
  [1] colorspace_2.1-0   ellipsis_0.3.2     class_7.3-21      
  [4] rgdal_1.6-5        rprojroot_2.0.3    fs_1.6.1          
  [7] rstudioapi_0.14    proxy_0.4-27       roxygen2_7.2.3    
 [10] farver_2.1.1       remotes_2.4.2      waldo_0.4.0       
 [13] DT_0.27            fansi_1.0.4        xml2_1.3.3        
 [16] codetools_0.2-19   splines_4.2.3      cachem_1.0.7      
 [19] knitr_1.42         pkgload_1.3.2      jsonlite_1.8.4    
 [22] shiny_1.7.4        readr_2.1.4        compiler_4.2.3    
 [25] tictoc_1.1         Matrix_1.5-3       fastmap_1.1.1     
 [28] lazyeval_0.2.2     cli_3.6.1          later_1.3.0       
 [31] s2_1.1.2           htmltools_0.5.5    prettyunits_1.1.1 
 [34] tools_4.2.3        gtable_0.3.3       glue_1.6.2        
 [37] dplyr_1.1.1        wk_0.7.2           Rcpp_1.0.10       
 [40] jquerylib_0.1.4    raster_3.6-20      vctrs_0.6.1       
 [43] crosstalk_1.2.0    xfun_0.38          stringr_1.5.0     
 [46] ps_1.7.4           brio_1.1.3         mime_0.12         
 [49] miniUI_0.1.1.1     lifecycle_1.0.3    devtools_2.4.5    
 [52] terra_1.7-23       scales_1.2.1       hms_1.1.3         
 [55] promises_1.2.0.1   rex_1.2.1          parallel_4.2.3    
 [58] TMB_1.9.3          RColorBrewer_1.1-3 yaml_2.3.7        
 [61] memoise_2.0.1      ggplot2_3.4.2      sass_0.4.5        
 [64] stringi_1.7.12     desc_1.4.2         e1071_1.7-13      
 [67] pkgbuild_1.4.0     attempt_0.3.1      rlang_1.1.0       
 [70] pkgconfig_2.0.3    evaluate_0.20      lattice_0.20-45   
 [73] purrr_1.0.1        sf_1.0-12          htmlwidgets_1.6.2 
 [76] labeling_0.4.2     processx_3.8.0     tidyselect_1.2.0  
 [79] here_1.0.1         bookdown_0.33      magrittr_2.0.3    
 [82] R6_2.5.1           generics_0.1.3     profvis_0.3.7     
 [85] DBI_1.1.3          pillar_1.9.0       withr_2.5.0       
 [88] units_0.8-1        sp_1.6-0           tibble_3.2.1      
 [91] INLA_22.12.16      crayon_1.5.2       KernSmooth_2.23-20
 [94] utf8_1.2.3         tzdb_0.3.0         rmarkdown_2.21    
 [97] urlchecker_1.0.1   usethis_2.1.6      grid_4.2.3        
[100] callr_3.7.3        testdown_0.1.2     splancs_2.01-43   
[103] digest_0.6.31      classInt_0.4-9     xtable_1.8-4      
[106] tidyr_1.3.0        httpuv_1.6.9       covr_3.6.2        
[109] munsell_0.5.0      bslib_0.4.2        sessioninfo_1.2.2
Glossary (click to expand)
  • A file is one test-*.R file from the testthat folder.
  • A test is one function call that starts with test_that('',.
  • An expectation is a function call that starts with expect.
  • A successful expectation is an expectation where the test is valid.
  • A failed expectation is an expectation where the test is invalid.
  • An expectation with warning is an expectation where the code of the test returned a warning.
  • An errored expectation is an expectation where the code of the test returned an error (further expectations in the test are not run).
  • A validated skip expectation is an expectation that starts with skip, and which has been validated (further expectations in the test are not run).
  • A skipped expectation is an expectation which has not been run because it comes after an expectation with error or a validated skip expectation in the test.